Installations and Integrations
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      What is the sequence editor tool in SciNote?

      The sequence editor tool in SciNote is an integration of the open-source version of the Open Vector Editor (OVE) developed by Teselagen Biotechnology.

      The sequence editor is a molecular biology tool add-on feature integrated into SciNote that allows users to visualize and manipulate genomic files. 

      You can create a new sequence file or import .dna, .fasta, .gb, and .json files

      The tool can be accessed from the Protocol section and the Results section in a Task in SciNote.

       

      To access the tool from the Protocol section:

      1. Open a Task and navigate to the protocol section.
      2. Create a new Step if there isn't one already there.
      3. Click on 'Insert content', select 'File', and then select 'New sequence'. SeqEditor_protocol

      4. This will open the sequence editor tool in SciNote.

      To access the tool from the Results section:

      1. Open a Task and navigate to the Results section.
      2. Add a new Result.
      3. Click on 'Insert content', select 'File', and then select 'New sequence'.SeqEditor_Result
      4. This will open the sequence editor tool in SciNote.

       

      Once you have completed working on your sequence, click 'Save' and all your changes will be saved to the file created in the Protocol or Results section of the Task within SciNote. 
      You can also export your sequence file and download it to share outside of SciNote. The file can be exported in the following formats:
        • .json
        • .fasta
        • .gb

       

      The sequence editor is equipped with various features such as:

      • Plasmid visualization
      • Primer design
      • PCR simulation
      • Restriction digestion simulation

      ...and more!

       

      For more information on this tool, please check out the detailed walkthrough below:

      *Reach out to your Customer Success Manager or Account Manager to discuss add-on pricing and enabling the gene sequence editor tool for your SciNote account.

      If you have any additional questions, please, do not hesitate to contact us at support@scinote.net. For more information about the Premium plans, please request a quote.